FAQ

• BIDS
  • What is a BIDS way to name and store Regions of Interest (ROIs)?
• General
  • Can I use parallelization with bidspm?
  • How can I know that things are set up properly before I run an analysis?
  • How can I prevent from having SPM windows pop up all the time?
  • How can I run bidspm from the command line?
  • How can I run bidspm only certain files, like just the session 02 for example?
  • What happens if we run same code twice?
• Preproc
  • What images are resampled during preprocessing and to what resolution?
• Results
  • How can I change which slices are shown in a montage?
• SPM
  • How can get the data from some specific voxel in a nifti image?
  • How can I use SPM image calculator (imcalc) to create a ROI?
  • How can set the value of a specific voxel in a nifti image?
  • How do I get the header of a nifti image?
  • How do I know which matlab function performs a given SPM process?
  • How do I merge 2 masks with SPM?
  • What is the content of the SPM.mat file?
• Stats
  • How can change the name of the folder of the subject level analysis?
  • How can I see what the transformation in the BIDS stats model will do to my events.tsv?
  • How should I name my conditions in my events.tsv?
  • How should I structure my data to run my statistical analysis?